Research Article |
Corresponding author: Amanda Angélica Carmes ( amandacarmes@hotmail.com ) Academic editor: Patricia Nunes-Silva
© 2019 Amanda Angélica Carmes, Michele de Sá Dechoum, Pedro Fiaschi.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Carmes AA, Dechoum MS, Fiaschi P (2019) The predominant role of soil in determining species composition of fern communities in subtropical coastal forest ecosystems. Neotropical Biology and Conservation 14(4): 559-575. https://doi.org/10.3897/neotropical.14.e49028
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Ferns are an important component in the understorey of tropical forests and their distribution is influenced by several biotic and abiotic factors. At a regional scale, soil characteristics and canopy openness play an important role in fern species composition and richness, as well as in the abundance of individuals. Our objective was to compare the influence of edaphic conditions and vegetation structure on the abundance and distribution of fern communities in Atlantic forest and restinga forest. Our hypotheses were that fern species richness and diversity are higher in Atlantic forest than in restinga due to limiting conditions in this habitat and the composition of fern species in Atlantic forest differs from restinga, especially due to differences in edaphic conditions. A principal coordinates analysis was applied to ordinate sampling units in relation to the environmental variables and a permutational multivariate analysis of variance was used to test that environmental variables did not differ between the two vegetation types. Species richness was compared using rarefaction curves. The influence of abiotic variables in species composition and abundance was verified using canonical correspondence analysis. No differences were observed in species richness, diversity or dominance between vegetation types, although abundance was higher in restinga. Fern communities respond to edaphic conditions and vegetation structure variations between vegetation types, the soil playing a major role. A greater variety of habitats resulting from differences in soil drainage in restinga facilitates the co-existence of species with different ecological tolerance, increasing local diversity and compensating for limiting conditions in restinga.
Samambaias são um importante componente do subosque das florestas tropicais e sua distribuição está condicionada a diversos fatores bióticos e abióticos. Em escala regional, características do solo e da abertura do dossel exercem importante papel na composição e riqueza de espécies de samambaias, bem como na abundância dos indivíduos. O objetivo do estudo foi comparar a influência das condições edáficas e da estrutura da vegetação na abundância e distribuição de comunidades de samambaias na floresta Atlântica e na floresta de restinga. As hipóteses foram que a riqueza de espécies e a diversidade de samambaias são maiores na floresta Atlântica do que na restinga devido às condições limitantes neste habitat e, a composição de espécies de samambaias na Mata Atlântica difere da restinga especialmente devido à diferenças nas condições edáficas. Uma análise de coordenadas principais foi aplicada, para ordenar unidades amostrais em relação às variáveis ambientais, e uma análise de variância multivariada permutacional foi usada para testar se as variáveis ambientais não diferiram entre os dois tipos de vegetação. A riqueza de espécies foi comparada usando curvas de rarefação. A influência das variações abióticas na composição e abundância das espécies foi verificada por meio da análise de correspondência canônica. Não foram observadas diferenças na riqueza, diversidade ou dominância entre os tipos de vegetação, embora a abundância tenha sido maior na restinga. As comunidades de samambaias respondem às condições edáficas e às variações da estrutura da vegetação entre os dois tipos de vegetação, tendo o solo um papel importante. A maior variedade de habitats decorrentes das diferenças na drenagem do solo na restinga facilita a coexistência de espécies com diferentes tolerâncias ecológicas, aumentando a diversidade local e compensando as condições limitantes na restinga.
abiotic factors, Brazil, canopy cover, diversity, dominance, nutrient richness, vegetation structure
fatores abióticos, Brasil, cobertura do dossel, diversidade, dominância, riqueza de nutrientes, estrutura da vegetação
Ferns are cosmopolitan, occurring in virtually all tropical, temperate and semi-arid ecosystems (
Soils with higher clay content, moisture, organic matter and exchangeable cations tend to support more fern species, while in limiting edaphic conditions, such as high aluminium content (
Changes in canopy openness and composition also exert influence on the fern communities in the understorey. For instance, high light incidence has negative effects on most ferns (
Atlantic forests and restinga forests (restinga hereafter) are part of the vegetation types in the Atlantic Forest biodiversity hotspot (
This study was conducted in Lagoa do Peri Municipal Park (27°42'41"–27°46'29"S and 48°30'06"–48°33'34"W), Lagoa da Conceição Dunes Municipal Park (27°36'24"–27°38'39"S and 48°26'49"–48°28'05"W) and Lagoa Pequena natural heritage site (27°39'24"–27°39'35"S and 48°28'34"–48°28'20"W) (Florianópolis, southern Brazil) (Fig.
Lowland Atlantic forests develop on areas between 5 and 30 m a.s.l. on coastal plains (
Restinga is composed of well developed herbaceous and shrub layers, as well as trees 5 to 15 m high, depending on substrate conditions and the influence of salinity (
A total of 40 plots measuring 10 m × 10 m along existing trails were set up, 20 in Atlantic forest remnants and 20 in restinga remnants. All 20 plots of the Atlantic forest and 15 plots of restinga were set up in Lagoa do Peri Municipal Park; the remaining restinga plots were set up in Lagoa da Conceição Dunes Municipal Park (three plots) and Lagoa Pequena natural heritage site (two plots) (Fig.
Samples of fertile and sterile terrestrial plants and hemi-epiphytes in direct contact with the soil were collected in each plot. The number of plants of each species was estimated for each plot. This estimation was based on counting the number of fronds of seven plants of each species outside the plots.The average value of frond number per species was then used as a denominator in the fraction of observed frond numbers for each species in the plots to estimate the number of plants of each species in the plots (
The plant samples collected were identified, based on specialised bibliography for each family. The classification used follows
All tree stems above 10 cm in circumference at ground level and the percentage of canopy cover were measured in each plot. Diameter at ground level (DGL) was then calculated from circumference measurements and percentage of canopy cover was estimated from digital photographs taken with a Sony Cyber-shot camera. The camera was placed in the centre of each plot at ground level with the lens pointing upwards. Photographs were analysed with the Coral Point Count with Excel extensions (CPCe) software, version 4.1 (
Composite soil samples (500 g) were collected in each plot (subdivided in four quadrats) by mixing five subsamples (one per quadrat and one in the centre). All samples were taken from 0–20 cm depth after removal of litter. The soil samples were left to dry at room temperature for seven days or until completely dry (
All physical analyses were conducted at the Water, Soil and Vegetable Tissue Laboratory of the Rural Engineering Department at the Agrarian Sciences Center of the Federal University of Santa Catarina. The physical analyses determined clay, sand and silt contents using the pipette method described by
A principal coordinates analysis (PCoA) (
Generalised linear models (GLM) were used to compare species abundance, richness, diversity [Shannon-Wiener (H’) and Simpson (D)] and dominance [Simpson index (1-D)] between vegetation types. While the Poisson distribution was assumed for richness and abundance variables, the Gamma distribution was assumed for species diversity and dominance indices, as well as edaphic and vegetation structure variables (canopy cover and DGL). The log link function was assumed for the relationship between the response and explanatory variables. The validation of each model was based on a graphical analysis of residuals. Species richness was estimated for the vegetation types using rarefaction curves (Chao estimator) and using interpolated and extrapolated data, based on the frequency of incidence of each species in the sampling plots (100 permutations; 10 sampling units for interpolation and 50 for extrapolation; 95% confidence interval).
The influence of soil characteristics, canopy cover and DGL on species composition of the sampled fern species was assessed using canonical correspondence analysis (CCA) (
The R software version 3.1.3 (
A total of 805 specimens were sampled, 520 in restinga and 285 in Atlantic forest. These plants were classified in eight families, 14 genera and 14 species (Suppl. material
The families with higher richness in restinga were Blechnaceae, Polypodiaceae and Pteridaceae, each represented by two species. Blechnaceae was the most abundant (192 plants) due to the high density of Telmatoblechnum serrulatum in the plots where it occurred, especially in areas prone to flooding. The family best represented in Atlantic forest, both in number of species and number of plants, was Pteridaceae (three species, 151 plants). Two of the three most abundant species in Atlantic forest (Adiantum pentadactylon, Anemia phyllitidis and Doryopteris pentagona) belong to this family (Suppl. material
The first two axes of the PCoA explained 62.6%of the explained variation (PCoA 1: 36.1% and PCoA 2: 26.5%). There was a clear distinction between the two vegetation types in terms of the environmental variables measured (Fig.
Representation of the principal coordinates analysis (PCoA) and result of the permutational multivariate analysis of variance (PERMANOVA) for environmental variables (canopy cover and DGL, soil physical and chemical parameters, flooding tendency) measured in 40 plots in remnants of Atlantic forest (n = 20) and restinga (n = 20).
No significant difference was found between the vegetation types in terms of species richness, diversity, [Simpson (D) and Shannon-Wiener (H’) indices] or dominance [Simpson index (1-D)] (Table
Average values (±SE) of species abundance, richness, diversity [Shannon-Wiener (H’) and Simpson (D)] and dominance [Simpson (1-D)] in plots in remnants of Atlantic forest (AF) (n = 20) and restinga (RF) (n = 20). P values refer to generalised linear models realised for each variable for comparison between the two vegetation types. Significant P values are indicated with an asterisk.
RF | AF | ||
---|---|---|---|
Average (±SE) | Average (±SE) | P | |
Abundance | 26 (±16.31) | 14.25 (±18.04) | <0.001* |
Richness | 2.30 (±1.03) | 2.05 (±0.82) | 0.59 |
Shannon-Wiener (H’) | 0.477 (±0.35) | 0.480 (±0.36) | 0.98 |
Simpson (D) | 0.289 (±0.22) | 0.307 (±0.23) | 0.81 |
Simpson (1-D) | 0.710 (±0.22) | 0.693 (±0.24) | 0.81 |
The canonical correspondence analysis showed that 53.67% of the variation in the species matrix was explained by the environmental variables used in the analysis. The first two axes represented 55.85% of the explained variation (CCA 1: 28.69% and CCA 2: 27.16%, Table
Species rarefaction curves generated from 50 permutations, based on the incidence frequency of each species in the sampled plots in remnants of Atlantic forest (AF) (n = 20) and restinga (RF) (n = 20). Full lines represent data interpolation (up to 20 plots for each vegetation type) and dashed lines represent data extrapolation. Lighter coloured areas indicate a 95% confidence interval.
Eigenvalues of the CCA axes and the proportion of variation explained by each of the axes.
Eigenvalue | Proportion explained | |
---|---|---|
Axis 1 | 0.9022 | 0.2869 |
Axis 2 | 0.8540 | 0.2716 |
Axis 3 | 0.6405 | 0.2037 |
Axis 4 | 0.3361 | 0.1069 |
Axis 5 | 0.1928 | 0.0613 |
Axis 6 | 0.1573 | 0.0500 |
Axis 7 | 0.0484 | 0.0154 |
Axis 8 | 0.0122 | 0.0038 |
Axis 9 | 0.0012 | 0.0004 |
Environmental variables used in Canonic Correspondence Analysis (CCA), their correlations with ordination axes and significance in species abundance (Monte Carlo test) in plots in remnants of Atlantic forest (n = 20) and restinga (n = 20). Al: aluminium content; Ca: calcium content; Canopy: percentage of canopy cover; Clay: percentage of clay; Flooding: flooding tendency; Mean DGL: mean ground level diameter; P: phosphorus content; Sand: percentage of sand; SMP: index SMP. Significant P values are indicated with an asterisk.
Parameters | Correlations | P | |||||
---|---|---|---|---|---|---|---|
CCA 1 | CCA 2 | CCA 3 | CCA 4 | CCA 5 | CCA 6 | ||
Flooding | -0.5854 | -0.1514 | 0.5679 | -0.1525 | -0.1651 | 0.0857 | 0.04* |
Sand (%) | -0.5074 | 0.4337 | 0.2593 | -0.4490 | -0.1517 | 0.0075 | 0.001* |
Clay (%) | 0.3426 | -0.5834 | 0.2713 | -0.2441 | 0.2533 | 0.2521 | 0.001* |
P (mg/dm3) | -0.4618 | -0.1072 | 0.3669 | -0.1635 | -0.0685 | 0.0850 | 0.04* |
SMP | 0.3236 | 0.3728 | -0.4166 | -0.2047 | 0.0018 | 0.5098 | 0.07 |
Al (cmolc/d) | -0.1265 | 0.3934 | -0.0248 | 0.1723 | 0.3009 | 0.1934 | 0.16 |
Ca (cmolc/d) | 0.5334 | -0.6994 | 0.0864 | -0.0669 | -0.0312 | 0.3301 | 0.001* |
Canopy (%) | 0.1318 | -0.5689 | 0.0258 | -0.0334 | -0.6813 | -0.1437 | 0.01* |
Mean DGL | -0.7116 | -0.5891 | -0.0410 | -0.2421 | 0.2138 | -0.0258 | 0.001* |
Two separate groups were distinguished by plot ordination (Fig.
The ordination of species, based on edaphic variables and on vegetation structure variables, showed that Telmatoblechnum serrulatum, Pleopeltis lepidopteris and Rumohra adiantiformis occurred in plots with sandy soils, lower calcium concentration and higher aluminium concentration (Fig.
Plot (a) and species (b) ordination from plots in remnants of Atlantic forest (n = 20) and restinga (n = 20) and their correlation with nine abiotic variables [aluminium (Al), calcium (Ca), canopy cover, clay (%), flooding (Flo), ground level diameter (DGL), index SMP (SMP), phosphorus (P), sand (%)]. The axes show the percentage of variation explained by the constraining variables. The nine variables showed significant correlation with data variance (p ≤ 0.05) according to the Monte Carlo permutation test, but just those in red were not redundant [VIF (variance inflation factor) < 4]. Sampled species were: A. pen: Adiantum pentadactylon; A. phy: Anemia phyllitidis; A. ser: Asplenium serra; C. pha: Cyathea phalerata; D. pen: Doryopteris pentagona; L. eff: Lastreopsis effusa; N. bra: Neoblechnum brasiliense; P. lep: Pleopeltis lepidopteris; P. cyl: Polybotrya cylindrica; P. ara: Pteridium arachnoideum; P. den: Pteris denticulata; R. adi: Rumohra adiantiformis; S. lat: Serpocaulon latipes; T. ser: Telmatoblechnum serrulatum.
The observed differences in edaphic conditions and vegetation structure in general was followed by differences in fern abundance and species composition between the vegetation types in this study. While soils in Atlantic forest contained higher cation availability, such as calcium, soils in restinga contained lower cation availability and higher aluminium concentration. Different edaphic conditions, therefore, enable the establishment of some species to the detriment of others. Well drained soils in restinga favour P. lepidopteris, R. adiantiformis and S. latipes, as already observed by
The existence of flooded and non-flooded habitats in restinga produces a greater variety of habitats, facilitating the co-existence of species with different environmental tolerance (
Although species richness and diversity did not differ between vegetation types, fern abundance was higher in restinga, which was explained by the dominance of T. serrulatum and R. adiantiformis in some of the plots. The first was very abundant in periodically flooded soils, while the second occurred in higher abundance on well drained soils (
Canopy cover and DGL also determined the differences observed in species composition between vegetation types. Rumohra adiantiformis was more abundant in areas with lower canopy cover, while A. pentadactylon, A. phyllitidis, D. pentagona and L. effusa were more abundant in more shaded areas. These results corroborate information already described in scientific literature for R. adiantiformis. This species has a wide geographic distribution, occurring from open restinga to temperate Araucaria forests (
High DGL values, in association with higher canopy cover, probably favoured the establishment of more shade tolerant species in restinga, such as P. cylindrica. As forests in advanced successional stages provide more shade, the establishment of species with low tolerance to direct solar radiation is favoured. According to
The fern community seems to respond to variations in edaphic conditions and vegetation structure of the vegetation types compared in this study, in which the soil plays a predominant role. Different soil conditions of texture, fertility and drainage influence species composition. Aluminium content in the soil also seems to be important for the establishment of some terrestrial or hemi-epiphytic fern species. A greater variety of habitats due to differences in soil drainage in restinga tends to facilitate the co-existence of species with different levels of ecological tolerance, compensating for limiting conditions (low cation availability and high aluminium concentration), typical of this vegetation type.
The heterogeneity of habitats and environmental conditions which exists not only between vegetation types, but also within types, was an important factor in the differentiation of species composition, also showing the exclusivity of species to certain abiotic conditions. Therefore, habitat heterogeneity must be taken into account in conservation strategies aimed at the protection of a large number of species in this biodiversity hotspot.
We would like to thank the colleagues of the Plant Systematics Laboratory for their help in field excursions; FLORAM for issuing plant collection permits in the protected areas; employees of the Peri Lagoon Municipal Park, for collaboration; the Soil, Water and Vegetal Tissue Analyses Laboratory for processing physical soil analyses; CAPES for the scholarships granted to AAC and MSD and CNPq for the Research Productivity grant to PF (# 306228/2016-5).
Tables S1–S3
Data type: species data
Explanation note: Table S1. List of terrestrial and hemiepiphytic species sampled in 40 plots of Atlantic forest and restinga. Vegetation types – AF: Atlantic forest; RF: Restinga. Habitat- PF: periodically flooded soils; WD: well drained, dry soils not subject to flooding. Life form: Hm: hemiepiphyte; Tr: terrestrial. Protected area - LCDMP: Lagoa da Conceição Dunes Municipal Park; LP: Lagoa Pequena; LPMP: Lagoa do Peri Municipal Park. Table S2. Biotic and abiotic data of plots set up in remmants of Atlantic forest (AF) (n=20) and restinga (RF) (n=20) (Florianópolis, Santa Catarina, Brazil). Table S3. Biotic data of plots set up in remmants of Atlantic forest (AF) (n=20) and restinga (RF) (n=20) (Florianópolis, Santa Catarina, Brazil).